Journal of South China University of Technology(Natural Science Edition) ›› 2012, Vol. 40 ›› Issue (1): 120-124.

• Biological Engineering • Previous Articles     Next Articles

Construction of Metagenomic Fosmid Library from Activated Sludge

Gou Min  Qu Yuan-yuan  Zhou Ji-ti  Xu Bing-wen  Cao Xiang-yu   

  1. Key Laboratory of Industrial Ecology and Environmental Engineering of the Ministry of Education,Dalian University of Technology,Dalian 116024,Liaoning,China
  • Received:2011-08-05 Revised:2011-09-26 Online:2012-01-25 Published:2011-12-01
  • Contact: 曲媛媛(1976-) ,女,博士,副教授,主要从事环境微生物的生物转化研究.E-mail: qyy007@126.com E-mail:goumin@ yahoo.cn
  • About author:苟敏(1982-) ,女,博士生,主要从事污染物微生物修复研究.
  • Supported by:

    国家自然科学基金资助项目( 51078054, 20923006)

Abstract:

The construction of large-fragment metagenomic library helps to discover large-fragment functional genes and analyze their organization and function. In this paper,first,three methods,namely the CTAB method,the kit and the agarose-embedding method,were used to extract metagenomic DNA from activated sludge,and DNA fragments larger than 23 kbp were extracted by the agarose-embedding method. Then,the metagenomic DNA was ligated into pCC1FOS vector to construct a Fosmid library consisting of 5280 clones with an average insert fragment size of 35 ~40 kbp,which covered about 200Mbp of metagenomic DNA. Finally,one clone exhibiting amylase activity was rapidly screened from 200 randomly-picked clones via the activity-based screening. It is thus concluded that the Fosmid library constructed from activated sludge is feasible in the screening of novel functional genes by activitybased methods.

Key words: activated sludge, metagenomic DNA, Fosmid library, activity-based screening, amylase

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