Molecular Dynamic Simulation on Interaction of Antimicrobial Peptide HP( 2-20) and POPE Lipid Membrane

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  • School of Biological Science and Engineering,South China University of Technology,Guangzhou 510006,Guangdong,China
吴建华(1959-) ,男,教授,博士生导师,主要从事生物力学及其在细胞黏附、胞内信号转导和心脑血管疾病机理与防治中的应用研究

Received date: 2012-07-10

  Online published: 2012-09-01

Supported by

国家自然科学基金资助项目( 10772069, 10972081, 11072080, 31170887) ; 广东省工业攻关项目( 2008B011000017)

Abstract

As one of the most likely substitutes for conventional antibiotics,antimicrobial peptides ( AMPs) are ancient players in innate immunity. In the antimicrobial action of AMPs,an initial key event is that AMPs firstly contact with and then closely adhere to the bacterial membrane. In order to reveal this unknown process,a molecular dynamic ( MD) simulation is performed to examine the nonspecific interaction of AMP HP( 2-20) with the cell membrane,which is modeled by a POPE bilayer. The results show that the N-terminal of the peptide firstly contacts with the membrane,and then,companying with a rotation movement,the peptide slowly inclines toward and slightly inserts into the membrane; at the same time,the AMP limits the movements of the lipids adjacent to the peptide,which induces the membrane to become non-uniform and enhances the irregular fluctuation of the lipids, so that other peptides may find their chances of deeply inserting into the membrane.

Cite this article

Wu Jian-hua Liu Li Fang Ying Huang Qing-sheng . Molecular Dynamic Simulation on Interaction of Antimicrobial Peptide HP( 2-20) and POPE Lipid Membrane[J]. Journal of South China University of Technology(Natural Science), 2012 , 40(10) : 211 -218 . DOI: 1000-565X(2012)10-0211-08

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